Software Engineer- (NGS/WGS/WES/Transcriptome analysis, etc.) + python + cloud (related to aws or azure) at Eurofins

POSITION TITLE (ENGLISH): Software Engineer WORKING LOCATION: Bangalore SUMMARY OF POSITION AND OBJECTIVES: With knowledge and experience in Bioinformatics, the candidate needs to be able to develop data analysis pipelines in a Linux based environment and be proficient in analyzing sequencing data, interpreting results, and implementing interactive solutions. Job description: · Project Management of Sequencing based Bioinformatics Projects including data analysis, management, consulting, and interpretation of results. · Conceptualizing and developing customized bioinformatics solutions including interactive analysis for various sequencing based products. · Contribute to the maintenance and development of bioinformatics tools and resources through knowledge of internally developed systems, open-source programs, and commercial applications. · Benchmarking different tools on standard/gold standard datasets. · Work with R&D team members to develop, implement and maintain functioning pipelines and applications upstream and downstream of NGS data analysis, interpretation, and reporting workflows. · Support project management team through troubleshooting and resolution of encountered issues with data analysis and customer concerns. · Document all aspects of the bioinformatics environment for existing systems and newly implemented systems in a QM compliant way. Ensure versioning through a source control system of all pipelines, configurations, algorithms, tools, and applications used in production workflows. Requirements: · Master's in bioinformatics or biotechnology or any other equivalent degree. · Experience in analyzing sequencing data and interpreting results. · Experience in the application of bioinformatics tools and the development of pipelines in the field of DNA/RNA sequencing is ideal. · Programming experience in - Python, bash, R/ Bioconductor. · Familiarity with Unix based operating systems, job queuing systems (eg. SGE), git, Docker and common workflow language (CWL) based frameworks. · Good knowledge of written and spoken English is required. · R/ Shiny based or alternative dashboard development experience (advantage). · Experience in cloud computing (advantage). Methodology we have in place and expect to be used: · Kanban, Lean, Scaled Agile, Zero-Defect development method · Daily Stand-ups with other developers directly involved · Scrum of Scrums, Innovation Sprints (after every 3rd Sprint) · Continuous integration · Automatic Build and Deployments · Automated Unit & Functional Testing · Follow Development guidelines and coding style EVOLUTION: Working in the field of Sequencing and Bio-IT Production pipeline for RNA/DNA Sequencing analysis, the potential candidates will be having a high chance of becoming SME’s and would get a chance to manage the sequencing studies. What we offer: · A launch pad into various technical/management opportunities – within the many business lines of Eurofins globally – or into the management hierarchy in our different corporate functions. · The opportunity to grow your technical stack. · A chance to become part of a highly motivated international team of professionals.